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omics_annotation_2017 [2017/04/15 17:16] (Version actuelle)
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 +===== Omics-driven genome annotation =====
  
 +==== Lille, March 31st 2017  ====
 +This one-day symposium will focus on the contribution of Omics data (mainly ​
 +the high throughput sequencing data) in our knowledge and understanding of 
 +genome organization,​ genome architecture and genome syntactic and functional ​
 +annotation.  The idea is to understand how the available omics data are used 
 +by biologists and bioinformaticians to annotate genomes and to make sense 
 +between genome organization and functions. Some recent tools and new 
 +approaches will be presented.
 +
 +The meeting will take place at Polytech'​Lille (see below).
 +
 +
 +\\
 +
 +=== Programme ===
 +
 +    * **13:​00-13:​30** Registration/​Welcome
 +
 +    * **13:​30-14:​15** Alexandra Calteau (LABGeM, Genoscope Evry), //​{{:​acalteau_bilille2017.pdf|Accurate microbial genome annotation using MicroScope: an integrated system for community expertise of gene functions}}//​
 +
 +    * **14:​15-15:​00** Clara Benoit (INRIA, Lyon), //​{{:​cbenoit_presentation_lille_31032017.pdf|Annotation and differential analysis of alternative splicing using de novo assembly of RNAseq data}}//
 +
 +    * **15:​00-15:​45** Thibaut Hourlier (EBI, Cambridge), //​{{:​thourlier_gene_annotation_in_vertebrates_using_the_ensembl_gene_annotation_system.pdf|Gene annotation in vertebrates using the Ensembl gene annotation system}}//
 +
 +    * **15:​45-16:​05** Coffee break
 +
 +    * **16:​05-16:​50** Hadi Quesneville (INRA, Versaille), //​{{:​hadiquesneville_bilille-teannotation310317-ilovepdf-compressed.pdf|Transposable element annotation in complexe genomes}}//
 +
 +    * **16:​50-17:​35** Marion Dubarry (BioSeq, Genoscope Evry), //​{{:​mdubarry_omics-driven-genome.pdf|Annotation of genomes at the Genoscope}}//​
 +
 +
 +\\
 +
 +=== Registration === 
 +
 +Registration is free but required → [[https://​www.inscription-facile.com/​form/​ZAcZb8lKc25CCDOCopj2|Register here]]. It includes coffee breaks. \\
 +**Deadline**:​ 26th march 2017*
 +
 +\\
 +
 +=== How to get there ===
 +
 +The nearest metro station is "4 cantons",​ which is the last stop on the yellow subway line (line 1).
 +The meeting room is the Migeon amphitheater (center alley of Polytech'​Lille,​ ground floor).
 +
 +Map: http://​www.polytech-lille.fr/​plan-d-acces-p1787.html
 +
 +\\
 +
 +=== Organizing committee ===
 +
 +  * David Hot
 +  * Céline Poux
 +  * Rayan Chikhi
 +  * Cédric Lhoussaine
 +  * Marc Lensink
 +  * Vincent Vandewalle