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jalview_2018 [2018/05/15 08:42] (Version actuelle)
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 +====== Workshop Jalview ======
 +===Multiple Sequence Alignment and Analysis: investigating structure and function of protein, RNA and DNA ===
 +
 +\\
 +
 +**Date:** 28th May, 2018 (from 9:30 to 16:00)
 +
 +**Place:** Cité Scientifique,​ Villeneuve d'​Ascq ​
 +
 +** Instructor:​** James Procter (Jalview Coordinator,​ Division of Computational Biology, School of Life Sciences
 +University of Dundee, UK)
 +
 +\\
 +
 +This hands-on workshop is for students and researchers working with Protein, RNA and DNA sequence data. Participants will learn how to create, analyse and visualise multiple alignments with the Jalview Desktop ([[http://​www.jalview.org|www.jalview.org]]),​ and explore its capabilities for working with 3D structure, phylogenetic trees and annotation from public databases. ​
 +
 +Participants should bring their own laptop.
 +
 +\\
 +
 +== Schedules ==
 +
 +9.30am - Introduction to the Jalview Workshop
 +
 +9.45am - Launching Jalview, importing, exporting and navigating alignments.
 +
 +10.30am - Coffee break
 +
 +11am - Creating multiple alignments
 +
 +12.30pm - Lunch
 +
 +1.30pm - Alignment analysis: Shading, Trees and Principal Component Analysis
 +
 +2.30pm - Loading and Viewing 3D Structures
 +
 +3pm - Working with Features and annotation tracks
 +
 +3.30pm - Secondary structure and disorder prediction
 +
 +3.55pm - Wrapup ​
 +
 +
 +\\
 +
 +== Registration ==
 +
 +Registration is free, but mandatory: [[https://​www.inscription-facile.com/​form/​3GL5yJcWXR5xTPeIBaRB|form]].
 +
 +The deadline is May 20th, 2018, and the number of participants is limited to 25. 
 +
 +\\
 +
 +== Organization ==
 +
 +Eva-Maria Krammer, Marc Lensink, Hélène Touzet ([[bilille@univ-lille.fr]])